DrugBank Release Version 5.1.3

These DrugBank datasets are released under a Creative Common's Attribution-NonCommercial 4.0 International License

Released onVersionSizeCommandDownload (XML)Schema Definition
All drugs2019-04-025.1.3127 MBExampleView

These DrugBank datasets are released under a Creative Common's Attribution-NonCommercial 4.0 International License

Full Drug Structures in SDF Format

Drug groupReleased onVersionSizeCommandDownload (SDF)
All2019-04-025.1.37.37 MBExample
All (3D)2019-04-025.1.38.92 MBExample
Approved2019-04-025.1.32.7 MBExample
Experimental2019-04-025.1.33.37 MBExample
Nutraceutical2019-04-025.1.3154 KBExample
Illicit2019-04-025.1.3125 KBExample
Withdrawn2019-04-025.1.3156 KBExample
Investigational2019-04-025.1.32.55 MBExample

Structure External Links

New! The structure external links datasets are CSV files which include structure information in the form of InChI/InChI Key/SMILES as well as identifiers for other drug-structure resources (such as ChEBI, ChEMBL, etc.). Included in each dataset is also the PubChem Compound ID (CID) and the particular PubChem Substance ID (SID) for the given DrugBank record.

Drug groupReleased onVersionSizeCommandDownload (CSV)
All2019-04-025.1.31.33 MBExample
Approved2019-04-025.1.3347 KBExample
Experimental2019-04-025.1.3734 KBExample
Nutraceutical2019-04-025.1.316.5 KBExample
Illicit2019-04-025.1.322.7 KBExample
Withdrawn2019-04-025.1.330.5 KBExample
Investigational2019-04-025.1.3454 KBExample

Full Metabolite Structures in SDF Format New!

Released onVersionSizeCommandDownload (SDF)
2019-04-025.1.31.04 MBExample

Protein identifiers include external IDs to resources such as UniProt and PDB.These downloads are divided first by protein/compound type (target, transporter, etc.). Secondly they are divided by drug group (approved, illicit, etc.). Each archive contains 2 files: one for all target/enzyme/transporter/carriers and one with only those marked as pharmacologically active (directly related to the mechanism of action for at least one of the associated drugs).

Note that each row in the export CSV file also includes a concatenated list of DrugBank drugs IDs (semi-colon delimited) as the last column.

These DrugBank datasets are released under a Creative Common's Attribution-NonCommercial 4.0 International License

Drug Target Identifiers

Drug groupReleased onVersionSizeCommandDownload (CSV)
All2019-04-025.1.3444 KBExample
Approved2019-04-025.1.3278 KBExample
Small Molecule2019-04-025.1.3423 KBExample
Biotech2019-04-025.1.344.7 KBExample
Experimental2019-04-025.1.3248 KBExample
Nutraceutical2019-04-025.1.359.7 KBExample
Illicit2019-04-025.1.313.4 KBExample
Withdrawn2019-04-025.1.335.7 KBExample
Investigational2019-04-025.1.3247 KBExample

Drug Enzyme Identifiers

Drug groupReleased onVersionSizeCommandDownload (CSV)
All2019-04-025.1.343 KBExample
Approved2019-04-025.1.339.3 KBExample
Small Molecule2019-04-025.1.340 KBExample
Biotech2019-04-025.1.38.82 KBExample
Experimental2019-04-025.1.38.62 KBExample
Nutraceutical2019-04-025.1.38.42 KBExample
Illicit2019-04-025.1.32.76 KBExample
Withdrawn2019-04-025.1.34.53 KBExample
Investigational2019-04-025.1.328.8 KBExample

Drug Carrier Identifiers

Drug groupReleased onVersionSizeCommandDownload (CSV)
All2019-04-025.1.310.2 KBExample
Approved2019-04-025.1.39.77 KBExample
Small Molecule2019-04-025.1.39.8 KBExample
Biotech2019-04-025.1.31.35 KBExample
Experimental2019-04-025.1.33.42 KBExample
Nutraceutical2019-04-025.1.31.74 KBExample
Illicit2019-04-025.1.32.27 KBExample
Withdrawn2019-04-025.1.31.26 KBExample
Investigational2019-04-025.1.35.65 KBExample

Drug Transporter Identifiers

Drug groupReleased onVersionSizeCommandDownload (CSV)
All2019-04-025.1.315.7 KBExample
Approved2019-04-025.1.314.7 KBExample
Small Molecule2019-04-025.1.315.7 KBExample
Biotech2019-04-025.1.3743 BytesExample
Experimental2019-04-025.1.33.25 KBExample
Nutraceutical2019-04-025.1.32.87 KBExample
Illicit2019-04-025.1.31.38 KBExample
Withdrawn2019-04-025.1.31.95 KBExample
Investigational2019-04-025.1.39.99 KBExample

These DrugBank datasets are released under a Creative Common's Attribution-NonCommercial 4.0 International License

Drug Target Sequences (FASTA Format)

Drug groupReleased onVersionSizeCommandDownload
All2019-04-025.1.34.09 MBExample
Approved2019-04-025.1.32.59 MBExample
Small Molecule2019-04-025.1.33.94 MBExample
Biotech2019-04-025.1.3411 KBExample
Experimental2019-04-025.1.32.18 MBExample
Nutraceutical2019-04-025.1.3724 KBExample
Illicit2019-04-025.1.397.7 KBExample
Withdrawn2019-04-025.1.3327 KBExample
Investigational2019-04-025.1.32.35 MBExample

Drug Enzyme Sequences (FASTA Format)

Drug groupReleased onVersionSizeCommandDownload
All2019-04-025.1.3321 KBExample
Approved2019-04-025.1.3303 KBExample
Small Molecule2019-04-025.1.3294 KBExample
Biotech2019-04-025.1.368.6 KBExample
Experimental2019-04-025.1.374.6 KBExample
Nutraceutical2019-04-025.1.3101 KBExample
Illicit2019-04-025.1.325.8 KBExample
Withdrawn2019-04-025.1.344 KBExample
Investigational2019-04-025.1.3231 KBExample

Drug Carrier Sequences (FASTA Format)

Drug groupReleased onVersionSizeCommandDownload
All2019-04-025.1.366.2 KBExample
Approved2019-04-025.1.365 KBExample
Small Molecule2019-04-025.1.360.3 KBExample
Biotech2019-04-025.1.38.6 KBExample
Experimental2019-04-025.1.312.6 KBExample
Nutraceutical2019-04-025.1.310.8 KBExample
Illicit2019-04-025.1.33.5 KBExample
Withdrawn2019-04-025.1.310.3 KBExample
Investigational2019-04-025.1.350.8 KBExample

Drug Transporter Sequences (FASTA Format)

Drug groupReleased onVersionSizeCommandDownload
All2019-04-025.1.3281 KBExample
Approved2019-04-025.1.3277 KBExample
Small Molecule2019-04-025.1.3281 KBExample
Biotech2019-04-025.1.38.63 KBExample
Experimental2019-04-025.1.359.7 KBExample
Nutraceutical2019-04-025.1.365.9 KBExample
Illicit2019-04-025.1.316 KBExample
Withdrawn2019-04-025.1.339.5 KBExample
Investigational2019-04-025.1.3194 KBExample

These DrugBank datasets are released under a Creative Common's Attribution-NonCommercial 4.0 International License

Drug groupReleased onVersionSizeCommandDownload (FASTA Format)
All2019-04-025.1.346.6 KBExample
Approved2019-04-025.1.337.9 KBExample
Experimental2019-04-025.1.31.9 KBExample
Nutraceutical2019-04-025.1.3140 BytesExample
Illicit2019-04-025.1.3140 BytesExample
Withdrawn2019-04-025.1.34.08 KBExample
Investigational2019-04-025.1.331.5 KBExample

The DrugBank Open Data datasets are public domain datasets that can be used freely in your application or project (including commercial use). It is released under a Creative Common's CC0 International License.
To the extent possible under law, the person who associated CC0 with the DrugBank Open Data has waived all copyright and related or neighboring rights to the DrugBank Open Data. This work is published from: Canada.

DatasetDescriptionReleased onVersionSizeFormatCommandDownload
DrugBank VocabularyDrugBank identifiers, names, and synonyms to permit easy linking and integration into any type of project. 2019-04-025.1.3631 KBCSVExample
Download
DrugBank StructuresDrugBank structures, names, and synonyms to permit easy linking and integration into any type of project. 2019-04-025.1.33.37 MBSDFExample
Download